PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000595295
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 425aa    MW: 48247.2 Da    PI: 4.3579
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000595295genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM42.91.5e-1371362127
            NAM   2 ppGfrFhPtdeelvveyLkkkvegkk...leleevikevdiykv..ePwdLpkkvkaeek..ewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                    ppGfrF+Ptd e+v   L k v +k+      +++i+++ ++ +  eP+++ +++ +++   +  fF ++ k+ + ++ ++++ ++g+W+++g++ 
  MDP0000595295   7 PPGFRFDPTDXEIV-VLLSKIVVEKDplmAGYDSHIHKCSLFGHnsEPSEIWERYGGDQXhgQQLFFXSELKRXR-KNISRKMGHAGTWSESGSKX 100
                    89************.55666666666564334456****98754339****755444333344456665555443.4455557789*******966 PP

            NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                       +++ + +g k+ + f + + ++  +  W+++e +
  MDP0000595295 101 IEGHRNPNPIGRKRKFRFEN-KWKSEDHGXWLLEEXS 136
                    666668899*********85.55555899****9965 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019418.11E-134168IPR003441NAC domain
PROSITE profilePS5100516.8786168IPR003441NAC domain
PfamPF023655.2E-97134IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MPKFRPPPGF RFDPTDXEIV VLLSKIVVEK DPLMAGYDSH IHKCSLFGHN SEPSEIWERY  60
GGDQXHGQQL FFXSELKRXR KNISRKMGHA GTWSESGSKX IEGHRNPNPI GRKRKFRFEN  120
KWKSEDHGXW LLEEXSLYDA AAAHDCSDTK ASKNRYDFDF VICKMRRKCG ENKRKRSDDP  180
NTNNVEEPQE SCSTLITNTD HLVLPLPDES NKRKRMTDIA YDDDPALFFN EDLLITSPTD  240
TFSIEELLAP LDSESALASS ENLSPDQMAE TQEDVPLPTV GYAWPGADDG GPLETYYPIP  300
SHYYPLEDHQ PKDQNVNVIN NGEESXDILF LDDNMLRSSH IPTFDSEDIF ATLDFDHDQK  360
DGNQEQQLPL PTAGSAQLAV EDGGPIEAND QIPSNYFQNL LNQPFEDSTY DYCSDTFINE  420
LMGF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1785336
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-11NAC domain containing protein 32